纤维素降解菌N2-10菌株β-1,4-内切葡聚糖酶基因的克隆及表达

  • 狄聪颖 ,
  • 郭晓军 ,
  • 刘宏丽 ,
  • 郭威 ,
  • 朱宝成
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狄聪颖(1989—),女,河北河间人,河北农业大学在读硕士研究生. E-mail:dicy123@163.com

收稿日期: 2017-03-28

  网络出版日期: 2018-07-25

基金资助

河北省重点研发计划农业关键共性技术攻关专项(16226604D);河北省技术创新引导计划科技型中小企业技术创新资金专项(15C1303121015);沧州市科技支撑计划项目(161201007D);保定市科学技术研究与发展计划项目(16ZN007)

Cloning and expression of β-1,4-endoglucanase gene of cellulose derading bacteria N2-10

  • DI Congying ,
  • GUO Xiaojun ,
  • LIU Hongli ,
  • GUO Wei ,
  • ZHU Baocheng
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  • 1.College of Life Science, Agriculture University of Hebei, Baoding 071000, China; 2.Hebei Zhongbang Biotechnology Limited Company, Baoding 071000, China

Received date: 2017-03-28

  Online published: 2018-07-25

摘要

为探究枯草芽孢杆菌(Bacillus subtilis)N2-10菌株降解纤维素的机理,通过同源性比对设计兼并引物扩增菌株β-1,4-内切酶葡聚糖基因,并进行生物信息学分析,然后研究其在大肠杆菌中的表达情况.结果显示,该内切葡聚糖酶基因大小为1500 bp,共编码499个氨基酸,具有典型的纤维素酶结构,SDS-PAGE电泳检测其表观分子质量约为55 ku;刚果红染色显示,表达产物具有纤维素酶活性.

本文引用格式

狄聪颖 , 郭晓军 , 刘宏丽 , 郭威 , 朱宝成 . 纤维素降解菌N2-10菌株β-1,4-内切葡聚糖酶基因的克隆及表达[J]. 河北大学学报(自然科学版), 2018 , 38(4) : 403 -409 . DOI: 10.3969/j.issn.1000-1565.2018.04.010

Abstract

To validate the mechanism of cellulose degradation by Bacillus subtilis N2-10, through homology comparison,the degenerate primers was designed and the β-1,4-endoglucanase gene of B. subtilis N2-10 was amplified. By useing bioinformatics tools in analyzing the sequences of genes and proteins and considering that the expression of the β-1,4-endoglucanase gene in E.coli, the result shows that, this gene is 1 500 bp, which could totally encodle 499 amino acids. This study also found that it had the typical structure of cellulose. SDS PAGE analysis found that the apparent molecular weight of the expression product was about 55 ku. Congo red staining analysis found that the expression product had the activity of cellulose.

参考文献

[1] 李梦祝,潘云霞. 氮源对复合菌系XCP-1降解氨化稻秆性能的影响[J]. 西南大学学报(自然科学版),2016,36(8):16-21. DOI: 10.13718/j.cnki.xdzk. 2016.08.003. LI M Z, PAN Y X. Effect of nitrogen sources on biodegradation of ammoniated rice straw by microbial consortium XCP-1[J]. Journal of Southwest University(Natural Science Edition), 2016,36(8):16-21. DOI: 10.13718/j.cnki.xdzk. 2016.08.003.
[2] 刘利,李红亚,闫志宇,等. 发酵花生秧粉对于肥猪生产性能的影响及其促生长机理[J]. 河北大学学报(自然科学版),2015,35(4):390-398. DOI:10.3969/j.issn.1000-1565. 2015.04.010. LIU L, LI H Y, YAN Z Y, et al. Effect of fermented peanut stem powder for fattening pigs on productive performance and the growth promotion mechanism[J]. Journal of Hebei University(Natural Science Edition), 2015, 35(4):390-398. DOI:10.3969/j.issn.1000-1565. 2015.04.010.
[3] 朱宝成. 超级人工体外瘤胃——秸秆发酵生产高蛋白饲草技术[J]. 北方牧业,2014(9):14-16.
[4] 李红亚,李术娜,王树香,等. 产芽孢木质素降解菌MN-8的筛选及其对木质素的降解[J]. 中国农业科学,2014,47(2):324-333. DOI: 10.3864/j.issn.0578-1752.2014.02.012. LI H Y, LI S N, WANG S X, et al. Screening, identification of lignin-degradating bacillus MN-8 and its characteristics in degradation of maize straw lignin[J]. Scientia Agricultura Sinica, 2014,47(2):324-333. DOI: 10.3864/j.issn.0578-1752.2014.02.012.
[5] 王全,李术娜,李红亚,等. 产芽孢纤维素降解细菌XN-13菌株筛选及酶活力的测定[J]. 中国农学通报,2009,25(11):180-185. WANG Q, LI S N, LI H Y, et al. Screening and identification on capable of degrading cellulose of produce spore cellulose decomposing bacteria XN-13[J]. Chinese Agricultural Science Bulletin, 2009,25(11):180-185.
[6] 卢敏,王帅豪,狄元冉,等. 纤维素酶基因克隆与表达[J]. 动物营养学报,2012,24(6):1013-1018. DOI: 10.3969 /j.issn.1006-267x.2012.06.004. LU M, WANG S H, DI Y R, et al. Cloning and expression of cellulase genes[J]. Chinese Journal of Animal Nutrition, 2012,24(6):1013-1018. DOI:10.3969/j.issn.1006-267x.2012.06.004.
[7] 赵燕,陈庚华,周卫,等. 纤维素酶及其基因研究进展[J]. 生物技术通报,2013(2):35-40. DOI:10.13560/j.cnki.biotech.bull.1985.2013.02.024. ZHAO Y, CHEN G H, ZHOU W, et al. Progress of cellulase and cellulase gene research[J]. Blotechnology Bulletin, 2013(2):35-40. DOI:10.13560/j.cnki.biotech.bull.1985.2013.02.024.
[8] 陈春岚,李楠. 细菌纤维素酶研究进展[J]. 广西轻工业,2007,1(1):18-20.
[9] 张隽. 纤维素酶的研究现状与前景[J]. 科技视界,2014,35:145-146.
[10] KIM S B, YOON J H,KIM H, et al. A Phylogenetic analysis of the genus Saccharomonospora Conducted with l6S rRNA gene sequences[J]. International Journal of Systematic Bacteriology, 1995, 45(2): 351-356. DOI: 10.1099/00207713-45-2-351.
[11] RAINEY F A, WARD-RAINEY N, KROPPENSTEDT R M, et al. The genus Nocardiopsis represents a Phylogenetically coherent tax on and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam.nov[J]. Intemational Journal of Systematic Bacteriology, 1996, 46(4):1088-1092. DOI:10.1099/00207713-46-4-1088.
[12] 王勇,袁华,刘国磊,等. 改进的碱裂解法大规模提取质粒DNA[J]. 数理医药学杂志,2010,23(5):519-520.
[13] 张冬冬,王世英,郭晓军,等. 一个棉花黄萎病抗菌肽基因25a2的克隆与表达[J]. 棉花学报,2009,21(5):346-350. ZHANG D D, WANG S Y, GUO X J, et al. Cloning and expression of a cotton verticillium wilt antibacterial peptide gene 25a2[J]. Cotton Science, 2009,21(5):346-350.
[14] 刘卫今,蒋勇,完迪迪. 简单高效的感受态细胞制备和质粒转化体系建立[J]. 安徽农业科学,2008,36(7):2745-2746. LIU W J, JIANG Y, WAN D D. Study on a simple and efficient preparation of competent cell and the establishment of plasmid transformation system[J]. Journal of Anhui Agri Sci,2008,36(7):2745 -2746.
[15] 刘慧娟,郭晓军,郭妍妍,等. 假蕈状芽孢杆菌34 kDa纤溶酶成熟肽基因的原核表达、纯化及活性分析[J]. 华北农学报,2011,26(2):143-146. LIU H J, GUO X J, GUO Y Y, et al. Expression and purification of Bacillus pseudomycoides 34 kD a fibrinolytic enzyme mature peptide geneand activity analysis[J]. Acta Agriculturae Boreali-Sinica,2011,26(2):143-146.
[16] 魏艳丽,周红资,扈进冬,等. 巨大芽孢杆菌AP25内切葡聚糖酶基因的克隆及序列测定[J]. 山东科学,2009,22(5):22-26. WEI Y L, ZHOU H Z, HU J D, et al. Cloning and sequencing of endo-glucanase gene of Bacillus megaterium AP25[J]. Shandong Science,2009,22(5):22-26.
[17] 罗伟光. 枯草芽孢杆菌源纤维素酶基因的克隆、表达及其酶学性质[D]. 洛阳:河南科技大学,2015. LUO W G. Cloning, expression and enzymatic properties of cellulase gene from Bacillus subtilis[D]. Luoyang:Henan University of Science and Technology,2015.
[18] 杨金莹,吕建仁,党宏月. 短小芽孢杆菌C-9葡聚糖内切酶基因的克隆及其在酿酒酵母中的表达[J]. 中国石油大学学报(自然科学版),2011,35(3):144-147. DOI: 10.3969 /j.issn.1673-5005.2011.03.029. YANG J Y, LÜ J R, DANG H Y. Cloning of glucanase gene from Bacillus pumilus C-9 and its expression in Saccharomyces cerevisiae[J]. Journal of China University of Petroleum, 2011,35(3):144-147. DOI: 10.3969 /j.issn.1673-5005.2011.03.029.
[19] 石贤爱,刘月,陈飞,等. 长梗木霉纤维素酶基因的克隆及序列测定[J]. 微生物学报,2010,37(5):671-676.
[20] SUMITOMO N, OZAKI K, KAWAI S, et al. Nucleotide sequence of the gene for an alkaline endogulucanase from an alkalophilic Bacillus and its expression in Escherichia coli and Bacillus subtilis [J]. Biosci Biotechnol Biochen,1992,56(6):872-877. DOI:10.1271/bbb.56.872.
[21] 张小梅,李单单,王禄山. 纤维素酶家族及其催化结构域分子改造的新进展[J]. 生物工程学报,2013,20(4):422-433. ZHANG X M, LI D D, WANG L S. Molecular engineering of cellulase catalytic domain based on glycoside hydrolase family [J]. Chinese Journal of Biotechnology,2013,20(4):422-433.
[22] YANG D L, WENG H B, WANG M E, et al. Cloning and expression of a novel thermostable cellulase from newly isolated Bacillus subtilis strain I15 [J]. Mol Biol Rep, 2010,37(4):1923-1929. DOI:10.1007/s11033-009-9635-y.
[23] 官兴颖,吴振芳,吴琦,等.枯草芽孢杆菌C-36内切葡聚糖酶基因的克隆及其在大肠杆菌中融合表达[J].生物加工过程,2009,3(5):68-72. GUAN X Y, WU Z F, WU Q,et al. Cloning, sequencing, and expression of endoglucanase gene from Bacillus subtilis C-36 in Escherichia coil[J]. Chinese Journal of Bioprocess Engineering, 2009,3(5):68-72.
[24] 刘海艳,白龙,赵海波,等. 纤维素高产菌的筛选鉴定及纤维素酶基因的克隆与表达[J]. 中国农业大学学报,2012,17(5):92-98. LIU H Y, BAI L, ZHAO H B, et al. Cloning and expression of a novel cellulose gene from an solated Bacillus pumilus strain[J]. Journal of Agricultural University, 2012,17(5):92-98.
[25] 王帅,陈冠军,张怀强,等. 碳水化合物活性酶数据库(CAZy)及其研究趋势[J]. 生物加工工程,2014,12(1):102-108. DOI: 10.3969 /j.issn.1672-3678.2014.01.015. WANG S, CHEN G J, ZHANG H Q, et al. Carbohydrate-active enzyme( CAZy)database and its new prospect[J]. Chinese Journal of Bioprocess Engineering, 2014,12(1):102-108. DOI: 10.3969/j.issn.1672-3678.2014.01.015.
[26] 张晓勇,陈秀霞,高向阳. 纤维素酶的蛋白质工程[J]. 纤维素科学与技术,2006,14(2):55-64. ZHANG X Y, CHEN X X, GAO X Y.Protein Engineering of Cellulases[J]. Journal of Cellulose Science and Technology,2006,14(2):55-64.
[27] 黄国昌, 熊大维, 顾斌涛. 内切葡聚糖酶基因克隆和表达研究进展[J]. 江西科学,2016,34(2):24-28. DOI: 1001-3679(2016)01-024-06. HUANG G C, XIONG D W, GU B T. Advance of endoglucanase gene cloning and expression[J]. Jiangxi Science, 2016,34(2):24-28. DOI: 1001-3679(2016)01-024-06.
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