In order to obtain the xylanase-producing functional strains, 592 endophytic bacteria from Cymbidium faberi roots were screened by using the method of Kongo red dye according to the size of hydrolyzed circle. The xylanase activity of strains screened was re-screened by DNS. The xylanase-producing strain was identified based on its morphological, physiological and biochemical characteristics, mole fraction of(G+C)and 16S rRNA gene sequence analysis. The results showed that 31 xylanase-producing strains were obtained, which account for 5.23% of the total strains. Seven strains with high xylanase yields were screened through DNS method. Strain 6hRe76 with the highest enzyme activity was obtained, of which the activity of xylanase was 57.15 U/ mL. The strain 6hRe76 was identified as Paenibacillus kribbensis. The research provided the new source for xylanase production.
MA Chunling
,
LI Sihan
,
ZHAO Dongfang
,
LI Guangshuo
,
MA Ruiyi
,
SUN Lei
. Screening and identification of xylanase-producing endophytic bacteria of Cymbidium faberi roots[J]. Journal of Hebei University(Natural Science Edition), 2017
, 37(5)
: 518
-522
.
DOI: 10.3969/j.issn.1000-1565.2017.05.011
[1] COLLINS T, GERDAY C, FELLER G. Xylanases, xylanases families and extremophilic xylanases[J]. FEMS Microbiol Rev, 2005, 29: 3-23. DOI:10.1016/j.femsre.2004.06.005.
[2] SALEH A M, RASHAD R A. Partial purification and characterization of xylanases from Aspergillus awamori and Aspergillus phoenicis[J]. African Journal of Microbiology Research, 2012, 6(23):5025-5034.
[3] SQUINA F M, MORT A J, DECKER S R, et al. Xylan decomposition by Aspergillus clavatus endo-xylanase[J]. Protein Expres Purif, 2009, 68(1): 65-71. DOI: 10.1016/j.pep.2009.06.014.
[4] FANG T J, LIAO B C, LEE S C. Enhanced production of xylanase by Aspergillus carneus M34 in solid-state fermentation with agricultural waste using statistical approach[J]. New Biotechnol, 2010, 27(1): 25-32. DOI:10.1016/j.nbt.2009.09.008.
[5] FANG H Y, CHANG S M, HSIEH M C, et al. Production, optimization growth conditions and properties of the xylanase from Aspergillus carneus M34[J]. J Mol Catal B-Enzyme, 2007, 49(16): 36-42. DOI:10.1016/j.molcatb.2007.08.002.
[6] 柏文琴, 王钦宏,马延和,等. 嗜热和嗜碱木聚糖酶研究进展[J]. 生物工程学报,2014,30(6): 828-837. DOI: 10.13345/j.cjb.140172. BAI W Q, WANG Q H, MA Y H, et al. Progress in the thermophilic and alkalophilic xylanases[J]. Chin J Biotech, 2014,30(6): 828-837.DOI: 10.13345/j.cjb.140172.
[7] RYAN R P, GERMAINE K, FRANKS A, et al. Bacterial endophytes: recent developments and applications[J]. FEMS Microbiol Lett, 2008, 278:1-9.DOI:10.1111/j.1574-6968.2007.00918.x.
[8] STAIEK A, WOERDENBAG H J, KAYSER O. Endophytes: exploiting biodiversity for the improvement of natural product-based drug discovery[J]. J Plant Interact,2008, 3:75-93.DOI: 10.1080/17429140801886293.
[9] 王雪鹏. 高产木聚糖酶芽孢杆菌的选育及产酶的研究[D]. 青岛:中国海洋大学,2004. WANG X P.Studies on the breeding of xylanase overproduction strain and the conditions of xylanase production from Bacillus sp.[D] Qingdao:Ocean University of China,2004.
[10] 包怡红, 李雪龙, 杨传平. 类芽孢杆菌木聚糖酶产生菌株的筛选及其产酶条件优化[J]. 东北林业大学学报,2008,36(9): 70-73. DOI:10.13759/j.cnki.dlxb.2008.09.006. BAO Y H, LI X L, YANG C P.Screening experiment of xylanase-producing Panibacillus sp. and optimization of production culture conditions[J].Journal of Northeast Forestry University,2008,36(9):70-73.DOI:10.13759/j.cnki.dlxb.2008.09.006.
[11] GOWDHAMAN D, MANASWINI V S, JAYANTHI V, et al. A comparison of plate assay methods for detecting extracellular cellulase and xylanase activity[J]. International Journal of Biological Macromolecules, 2014, 64: 90-98.
[12] BAILEY M J, BIELY P, POUTANEN K. Interlaboratory testing of methods for assay of xylanase activity[J]. J Biotechnol, 1992, 23(3): 257-270.
[13] EDWARDS U, ROGALL T, BLACKER H, et al. Isolation and direct complete nucleotide determination of entire genes: characterization of a gene coding for 16S ribosomal RNA[J]. Nucleic Acids Research, 1989, 17:7843-7853.DOI:10.1093/nar/17.19.7843.
[14] LANE D J. Nucleic acid techniques in bacterial systematics[M]. New York:John Wiley & Sons, 1991:115-175.
[15] SAITOU N, NEI M. The neighbor-joining method: a new method for reconstructing phylogenetic trees[J]. Molecular Biology Evolution, 1987, 4: 406-425.
[16] 东秀珠,蔡妙英. 常见细菌系统鉴定手册[M]. 北京:科学出版社. 2001:62-63,349-398.
[17] MESBAH M, PREMACHANDRAN U, WHITMAN W B. Precise measurement of G+C content of deoxyribonucleic acid by high performance liquid chromatography[J]. International Journal of Systematic and Evolutionary Microbiology, 1989, 39: 159-167.DOI:10.1099/00207713-39-2-159.
[18] POLIZELIM, RIZZATTIS, MONTI R, et al. Xylanases from fungi: properties and industrial applications[J]. Appl Microbiol Biotechnol, 2005, 67: 577-591. DOI: 10.1007/s00253-005-1904-7.
[19] 刘巍,范树田,李心治. 地衣芽抱杆菌H-1的鉴定及其产木聚糖酶性质的研究[J].工业微生物,1996,26(4): 11-15.
[20] 孙晓霞,谢响明,吴玉英,等. 白色链霉菌产木聚糖酶规律及其耐热耐碱性的初步研究[J]. 北京林业大学学报,2005,27(3):72-75. SUN X X, XIE X M, WU Y Y, et al. Introduction of xylanase from Strepoymyces albus and analysis of hermostability and alkali-tolerance[J]. Journal of Beijing Forestry University,2005,27(3):72-75.
[21] SERMSATHANASWADI J,BARAMEE S,TACHAAPAIKOON C,et al. The family 22 carbohydrate -binding module of bifunctional xylanase/β-glucanase Xyn10E from Paenibacillus curdlanolyticus B-6 has an important role in lignocellulose degradation[J]. Enzyme Microb Technol, 2017, 96: 75-84. DOI: 10.1016/j.enzmictec.
[22] KIM D R, LIM H K, LEE K I, et al. Identification of a novel cellulose-binding domain within the endo-β-1,4-xylanase KRICT PX-3 from Paenibacillus terrae HPL-003[J].Enzyme Microb Technol, 2016, 11(93-94):166-173.
[23] LIU Y, HUANG L, LI W, et al. Studies on properties of the xylanbinding domain and linker sequence of xylanase XynG11 from Paenibacillus campinasensis G11[J]. J Ind Microbiol Biotechnol, 2015, 42(12):1591-1599. DOI: 10.1007/s10295-015-1698-2.
[24] PADILHA I Q, VALENZUELA S V, GRISI T C, et al. A glucuronoxylan-specific xylanase from a new Paenibacillus favisporus strain isolated from tropical soil of Brazil[J].Int Microbiol, 2014, 17(3):175-184.DOI: 10.2436/20.1501.01.220.